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<p><b>SMART</b> (a <b>S</b>imple <b>M</b>odular <b>A</b>rchitecture <b>R</b>esearch <b>T</b>ool) is an online tool which allows the identification of &lt;a href="Protein domain"&gt;protein domains&lt;/a&gt; and the analysis of domain architecture.  
'''SMART''' (a '''S'''imple '''M'''odular '''A'''rchitecture '''R'''esearch '''T'''ool) is an online tool which allows the identification of &lt;a href="Protein domain"&gt;protein domains&lt;/a&gt; and the analysis of domain architecture.  
</p><p>You may use either a &lt;a href="Uniprot sequence identifier"&gt;Uniprot&lt;/a&gt;/&lt;a href="Ensembl sequence identifier"&gt;Ensembl sequence identifier&lt;/a&gt; (ID) / &lt;a href="Accession number"&gt;accession number&lt;/a&gt; (ACC) or the &lt;a href="Protein"&gt;protein&lt;/a&gt; sequence itself to perform the SMART analysis service.  
 
</p><p>Using the accession number or the name of a known protein domain, SMART will allow you to search a particular domain, and give you a detailed description of this domain.&#160;
You may use either a [[Uniprot|Uniprot]]&nbsp;[[Ensembl sequence identifier|Ensembl sequence identifier]]&nbsp;(ID) /&nbsp;[[Accession number|accession number]]&nbsp;(ACC) or the [[protein|protein]]&nbsp;sequence itself to perform the SMART analysis service.  
</p><p>Here is a link to the homepage of the site: &lt;a href="http://smart.embl-heidelberg.de/"&gt;http://smart.embl-heidelberg.de/&lt;/a&gt;
 
</p><p>More information about the site, and further literature relating to its use can be found here: &lt;a href="http://smart.embl-heidelberg.de/help/smart_about.shtml"&gt;http://smart.embl-heidelberg.de/help/smart_about.shtml&lt;/a&gt;
Using the accession number or the name of a known protein domain, SMART will allow you to search a particular domain, and give you a detailed description of this domain.&nbsp;  
</p><p>NB: This online tool is extremely useful (and expected to be used) when completing the bioinformatics module in stage 2 (CMB2005)
 
</p>
Here is a link to the homepage of the site:[http://smart.embl-heidelberg.de/ http://smart.embl-heidelberg.de/]
 
More information about the site, and further literature relating to its use can be found here: [http://smart.embl-heidelberg.de/help/smart_about.shtml http://smart.embl-heidelberg.de/help/smart_about.shtml]
 
NB: This online tool is extremely useful (and expected to be used) when completing the bioinformatics module in stage 2 (CMB2005)

Revision as of 03:59, 25 October 2013

SMART (a Simple Modular Architecture Research Tool) is an online tool which allows the identification of <a href="Protein domain">protein domains</a> and the analysis of domain architecture.

You may use either a Uniprot Ensembl sequence identifier (ID) / accession number (ACC) or the protein sequence itself to perform the SMART analysis service.

Using the accession number or the name of a known protein domain, SMART will allow you to search a particular domain, and give you a detailed description of this domain. 

Here is a link to the homepage of the site:http://smart.embl-heidelberg.de/

More information about the site, and further literature relating to its use can be found here: http://smart.embl-heidelberg.de/help/smart_about.shtml

NB: This online tool is extremely useful (and expected to be used) when completing the bioinformatics module in stage 2 (CMB2005)

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