Cystic fibrosis

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== Cystic Fibrosis  ==
 
== Cystic Fibrosis  ==
  
[[Cyctic fibrosis|Cystic Fibrosis is]] an [[Autosomal recessive disease|autosomal recessive disease]] located on [[Chromosome|chromosome]] 7. Cystic Fibrosis is caused by a mutation to the [[CFTR|CFTR]] ([[CFTR|Cystic Fibrosis Transmembrane Conductance Regulator]]) channel.&nbsp;The most common mutation is&nbsp;ΔF508, accounting for 70% of mutations in the [[Frequency of CFTR mutations by Ethnicity|Caucasian]] UK population,&nbsp;in which the [[Codon|triplet code]]&nbsp;([[Codon|codon]]) for the [[Amino acid|amino acid]] [[Phenylalanine|phenylalanine]] is deleted, disrupting Cl<sup>-</sup> transport. This [[Mutation|mutation]] belongs to the Class II group of mutations causing Cystic Fibrosis.<br>  
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[[Cyctic fibrosis|Cystic Fibrosis is]] an [[Autosomal recessive disease|autosomal recessive disease]] located on [[Chromosome|chromosome]] 7. Cystic Fibrosis is caused by a mutation to the [[CFTR|Cystic Fibrosis Transmembrane Conductance Regulator]]&nbsp;(CFTR) channel.&nbsp;The most common mutation is&nbsp;ΔF508, accounting for 70% of mutations in the [[Frequency of CFTR mutations by Ethnicity|Caucasian]] UK population,&nbsp;in which the [[Codon|triplet code]]&nbsp;([[Codon|codon]]) for the [[Amino acid|amino acid]] [[Phenylalanine|phenylalanine]] is deleted, disrupting Cl<sup>-</sup> transport. This [[Mutation|mutation]] belongs to the Class II group of mutations causing Cystic Fibrosis.<br>
  
[[CFTR|CFTR]] is composed of 3 types of domains. There are 12 [http://en.wikipedia.org/wiki/Transmembrane_protein Transmembrane] spanning domains, 2 Nucleotide Binding Domains (NBD’s - part of the ATP Binding Cassette domains) and an R domain (regulatory domain). The NBD’s are involved in the binding and hydrolysis of [[ATP|ATP]]. It is believed that the mutation that causes Cystic Fibrosis occurs on the Nucleotide Binding Domain 1.<br>  
+
[[CFTR|CFTR]] is composed of 3 types of domains. There are 12 [http://en.wikipedia.org/wiki/Transmembrane_protein Transmembrane] spanning domains, 2 Nucleotide Binding Domains (NBD’s - part of the ATP Binding Cassette domains) and an R domain (regulatory domain). The NBD’s are involved in the binding and hydrolysis of [[ATP|ATP]]. It is believed that the mutation that causes Cystic Fibrosis occurs on the Nucleotide Binding Domain 1.<br>
  
CFTR is part of the [[ABC Superfamily|ABC ]](ATP Binding Cassette) superfamily of transporters.  
+
CFTR is part of the [[ABC Superfamily|ABC ]](ATP Binding Cassette) superfamily of transporters.
  
 
== Cystic Fibrosis Classes  ==
 
== Cystic Fibrosis Classes  ==

Revision as of 14:42, 9 October 2014

Cystic fibrosis (CF) also known as mucoviscidosis is an inherited disease characterized by an abnormality in the glands that produce sweat and mucus. It is a chronic, progressive and usually fatal disease however, the life expectancy of CF patients is increasing due to advances in medical sciences and treatment and the median predicted survival age is currently 41 years old [1].

Cystic fibrosis affects various systems in children and young adults, including the following:

There are about 30,000 people in the US who are affected with the disease, and about 1,000 babies are diagnosed with it each year. It occurs mainly in Caucasians, who have a northern European heredity, although it also occurs in African-Americans, Asian Americans, and Native Americans.

Approximately one in 31 people in the US are carriers of the cystic fibrosis gene. These people are not affected by the disease and usually do not know that they are carriers. The most common type of cystic fibrosis mutation, affecting 75% of patients, is the deltaF508 mutation.

Contents

How does CF affect the respiratory system?

The basis for the problem with CF lies in an abnormal gene. The result of this gene defect is an atypical electrolyte transport system within the cells of the body. The abnormal transport system causes the cells in the respiratory system, especially the lungs, to absorb too much sodium and water. This causes the normal thin secretions in our lungs to become very thick and hard to remove. These thick secretions put the child with CF at risk for constant infection.

The high risk of infection in the respiratory system leads to damage in the lungs, lungs that do not work properly, and eventually death of the cells in the lungs. The most common causes for infection in the lungs of the CF patient are the following bacteria:

Over a period of time, PA becomes the most common bacteria that causes infection and becomes difficult to fight. A large percentage of respiratory infections in the CF patient are due to PA.

As a result of the high rate of infection in the lower respiratory tract, people with CF may develop a chronic cough, blood in the sputum, and sometimes can even have a collapsed lung. The cough is usually worse in the morning or after activity.

People with CF also have involvement of the upper respiratory tract. Some patients have nasal polyps that need surgical removal. Nasal polyps are small protrusions of tissue from the lining of the nose that go into the nasal cavity. Children also have a high rate of sinus infections.

How does CF affect the gastrointestinal (GI) system?

The organ primarily affected is the pancreas, which secretes substances that aid digestion and help control blood-glucose levels.

As a result of the abnormal electrolyte transport system in the cells, the secretions from the pancreas become thick and lead to an obstruction of the ducts of the pancreas. This obstruction then causes a decrease in the secretion of enzymes from the pancreas that normally help to digest food. A person with CF has difficulty absorbing proteins, fats, and vitamins A, D, E, and K.

The problems with the pancreas can become so severe that some of the cells in the pancreas can become destroyed. This may lead to glucose intolerance and insulin-dependent diabetes. About 35 percent of CF patients develop this type of diabetes in their 20s and 43 percent develop the disease after 30 years of age.

Another organ which may be affected by CF is the small intestine; it's function is to digest and absorb the nutrients from the food. 

In a person with CF the enzymes which help the digestion process become thick and sticky and therefore block these ducts between the pancreas and small intestine. 

Meconium (failure to pass feces) is a condition that occurs in newborns with CF, where the intestines are completely blocked. This occurs in about 10% of newborns with the condition. 

The symptoms that may be present due to the involvement with the GI tract

The liver may also be affected. A small number of patients may actually develop liver disease. Symptoms of liver disease may include:

How does CF affect the reproductive system?

Most males with CF have obstruction of the sperm canal known as congenital bilateral absence of the vas deferens (CBAVD). This results from the abnormal electrolyte transport system in the cells (brought about by the absence of fine ducts), causing the secretions to become thick and lead to an obstruction and in male patients 95% become infertile.  Women also have an increase in thick cervical mucus that may lead to a decrease in fertility, although many women with CF have children. This thick, mucus acts as a plug, presenting a physical barrier to the sperm cells' passage to the uterus.

What are the symptoms of cystic fibrosis?

The following are the most common symptoms for cystic fibrosis. However, individuals may experience symptoms differently. Symptoms may include:

This may cause a loss of salt. A loss of salt may cause an upset in the balance of minerals in the blood, abnormal heart rhythms, and, possibly, shock.

This may cause malnutrition, poor growth, frequent respiratory infections, breathing difficulties, and/or lung disease.

Other medical problems, such as:

As stated above, the symptoms of CF differ for each person. Infants born with CF usually show symptoms by age two. Some children, though, may not show symptoms until later in life. The following signs are suspicious of CF, and infants having these signs may be tested for CF:

The symptoms of cystic fibrosis may resemble other conditions or medical problems. Consult a physician for a diagnosis.

How is cystic fibrosis diagnosed?

Most cases of cystic fibrosis are now identified with newborn screening. In addition to a complete medical history and physical examination, diagnostic procedures for cystic fibrosis include a sweat test to measure the amount of sodium chloride (salt) present. Higher than normal amounts of sodium and chloride suggest cystic fibrosis. Other diagnostic procedures include:

For babies, who do not produce enough sweat, blood tests may be used.

Treatment for cystic fibrosis

Specific treatment for cystic fibrosis will be determined by your doctor based on:

Currently, there is no cure for CF. A cure would call for gene therapy at an early age and this has not been developed yet, although research is being done in this direction. The gene that causes CF has been identified and there are hopes that this will lead to an increased understanding of the disease. Also being researched are different drug regimens to help stop CF. Goals of treatment are to ease severity of symptoms and slow the progress of the disease. Treatment may include:

Management of problems that cause lung obstruction, which may involve:

Management of digestive problems, which may involve:

The genetics of cystic fibrosis

Cystic fibrosis (CF) is a genetic disease. This means that CF is inherited. A person will be born with CF only if two CF genes are inherited - one from the mother and one from the father. A person who has only one CF gene is healthy and said to be a "carrier" of the disease. A carrier has an increased chance of having a child with CF. This type of inheritance is called "autosomal recessive." "Autosomal" means that the gene is on one of the first 22 pairs of chromosomes which do not determine gender, so that the disease equally affects males and females. "Recessive" means that two copies of the gene, one inherited from each parent, are necessary to have the condition. Once parents have had a child with CF, there is a one in four, or 25 percent chance with each subsequent pregnancy, for another child to be born with CF. This means that there is a three out of four, or 75 percent chance, for another child to not have CF.

The birth of a child with CF is often a total surprise to a family, since most of the time (in eight out of 10 families) there is no previous family history of CF. Many autosomal recessive conditions occur this way. Since both parents are healthy, they had no prior knowledge that they carried the gene, nor that they passed the gene to the pregnancy at the same time.

Genes are founds on structures in the cells of our body called chromosomes. There are normally 46 total, or 23 pairs of chromosomes in each cell of our body. The seventh pair of chromosomes contains a gene called the CFTR (cystic fibrosis transmembrane regulator) gene. Mutations or errors in this gene are what cause CF. This gene is quite large and complex. Over 1,000 different mutations in this gene have been found which cause CF.

The risk for having a mutation in the gene for CF depends on your ethnic background (for persons without a family history of CF):

Ethnic Background Risk of CF Mutation Risk of Child with CF

Testing for the CF gene can be done from a small blood sample or from a cheek swab, which is a brush rubbed against the inside of your cheek to obtain cells for testing. Laboratories generally test for the most common mutations.

There are many people with CF whose mutations have not been identified. In other words, all of the genetic errors that cause the disease have not been discovered. Because not all mutations are detectable, a person can still be a CF carrier even if no mutations were found by carrier testing.

Testing for the CF gene is recommended for anyone who has a family member with the disease, or whose partner is a known carrier of CF or affected with CF.

Cystic Fibrosis

Cystic Fibrosis is an autosomal recessive disease located on chromosome 7. Cystic Fibrosis is caused by a mutation to the Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) channel. The most common mutation is ΔF508, accounting for 70% of mutations in the Caucasian UK population, in which the triplet code (codon) for the amino acid phenylalanine is deleted, disrupting Cl- transport. This mutation belongs to the Class II group of mutations causing Cystic Fibrosis.

CFTR is composed of 3 types of domains. There are 12 Transmembrane spanning domains, 2 Nucleotide Binding Domains (NBD’s - part of the ATP Binding Cassette domains) and an R domain (regulatory domain). The NBD’s are involved in the binding and hydrolysis of ATP. It is believed that the mutation that causes Cystic Fibrosis occurs on the Nucleotide Binding Domain 1.

CFTR is part of the ABC (ATP Binding Cassette) superfamily of transporters.

Cystic Fibrosis Classes

Class I: Premature Stop Codons (e.g. W1282X)

Class II: Abnormal Processing (e.g. ΔF508)
This involves the deletion of the amino acid, Phenylalanine at NBD1 (Nucleotide Binding Domain 1) of the CFTR (Cystic Fibrosis transmembrane conductance receptor). This mutation takes effect on the processing of the protein after leaving the Endoplasmic Reticulum. It adversely comprimises the trafficking/passage of the protein across the cytosol ultimately resulting in the the protein being degraded by the proteosome. This mutation is the most common mutation of the CFTR, causing >90% of Cystic Fibrosis cases [2].

Class III: Altered Regulation (e.g. G551D)

Class IV: Conductance Defect (e.g. R117H)

Class V: Reduced Protein Synthesis (e.g. A455E)[3]

Approaches to Treatment

Lung Function

Physiotherapy and mucolytics

Oral and Inhaled Antibotics

Anti-Inflammatory Drugs

Lung Transplant

Gene Therapy

Pharmacotherapy

Alternative Channel Therapy

Pancreatic Function

Pancreatic Enzyme Replacement

Nutrional Regime

References

  1. http://www.cftrust.org.uk/aboutcf/faqs#life [Accessed on 25th October 2012]
  2. J Biol Chem. 2010 Nov 12;285(46):35825-35. Epub 2010 Jul 28.
  3. David L. Rimoin, J. Michael Connor, Reed E. Pyeritz, Bruce R. Korf (2007). Emery and Rimoin's Principles and Practice of Medical Genetics e-dition. 5th ed. Amsterdam: Elsevier. p1354-1394.
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